Studies on sensitivity to tension and gating pathway of MscL by molecular dynamic simulation

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摘要 Mechanosensitive(MS)ionchannelsplayanimportantroleinvariousphysiologicalprocesses.Althoughthedeterminationofthestructureofmechanosensitivechanneloflargeconductance(MscL)makesthesimulationstudypossible,ithasnotsofarbeenpossibletodirectlysimulatethegatingmechanismofMscLinatomicdetail.Inthisarticle,MscLhasbeenstudiedviamoleculardynamic(MD)simulationstogainadetaileddescriptionofthesensitivitytolateraltensionandthegatingpathway.MscLundergoesconformationalrearrangementinsustaininglateraltension,andtheopenstateisobtainedwhen2.0MPalateraltensionisdirectlyappliedonthepureprotein.Duringtheopeningprocess,Loopregionrespondstotensionfirst,andthemechanicalsensitivityisfollowedbyS1domain.Transmembrane(TM)bundleisthekeypositionforchannelopening,andthemotionofTM1helicesfinallyrealizesthesignificantexpansionoftheconstrictedgatingpore.C-terminusdomainpresentsexpansionlaterduringtheTMopening.Inourstudy,returnofthewholeproteintotheinitialclosedstateisachievedonlyintheearlyopeningstage.Duringtherelaxationfromtheopenstate,theTMhelicesarethemostmobiledomain,whichisdifferentfromtheopeningprocess.
机构地区 不详
出处 《力学学报:英文版》 2013年2期
出版日期 2013年02月12日(中国期刊网平台首次上网日期,不代表论文的发表时间)
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